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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
FliA-3DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. (244 aa)    
Predicted Functional Partners:
PTH_1678
Hypothetical membrane protein.
 
 
 0.992
RpoB
DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.883
RpoC
DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.858
FlgM
Negative regulator of flagellin synthesis; Anti-sigma28 factor.
  
 
 0.827
RpoA
DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.779
PolA-2
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
  
 
 0.717
CheR
Methylase of chemotaxis methyl-accepting proteins.
  
  
 0.700
CheW
Chemotaxis signal transduction protein.
  
  
 0.700
CheA
Chemotaxis protein histidine kinase and related kinases.
  
  
 0.688
FlgC
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.653
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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