STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RbsBABC-type sugar transport system, periplasmic component. (386 aa)    
Predicted Functional Partners:
AraH
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.987
MglA
ABC-type sugar transport system, ATPase component.
 
 
 0.984
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
 
 
 0.962
BaeS-4
Signal transduction histidine kinase.
  
 
 0.933
PTH_0717
Hypothetical protein.
  
 
 0.738
PTH_0036
Hypothetical membrane-associated sensory histidine kinase; Containing COG5002, VicK, signal transduction histidine kinase domain.
  
 
 
 0.696
PTH_1597
Hypothetical protein; Containing COG3852 NtrB, signal transduction histidine kinase and COG3706 PleD, response regulator containing a CheY-like receiver domain and a GGDEF domain.
   
 
 0.674
PTH_2177
RTX toxins and related Ca2+-binding proteins.
  
     0.668
BaeS-2
Signal transduction histidine kinase.
   
 
 0.662
BaeS
Signal transduction histidine kinase.
    
 
 0.647
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.