STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_1775Hypothetical signaling protein; Containing predicted kinase (COG4639) and calcineurin-like phosphoesterase domain. (423 aa)    
Predicted Functional Partners:
PTH_1424
Hypothetical membrane protein; Containing partial COG3315, O-methyltransferase involved in polyketide biosynthesis.
   
   0.849
PTH_1774
Hypothetical protein.
       0.483
PTH_1322
Uncharacterized protein; With SCP/PR1 domains.
  
     0.476
PTH_2329
Uncharacterized conserved protein.
  
     0.466
PTH_1776
Hypothetical membrane protein.
       0.448
PTH_1777
Hypothetical membrane protein.
       0.448
LigT
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
  
   
 0.434
PTH_0087
Hypothetical membrane protein.
  
     0.415
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.