Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DivIVA | PTH_1821 | PTH_1824 | PTH_1821 | Cell division initiation protein. | Uncharacterized conserved protein; Belongs to the UPF0235 family. | 0.719 |
DivIVA | PTH_1822 | PTH_1824 | PTH_1822 | Cell division initiation protein. | Hypothetical protein. | 0.595 |
DivIVA | PTH_1823 | PTH_1824 | PTH_1823 | Cell division initiation protein. | Hypothetical protein; Containing ADP-ribose pyrophosphatase region (COG1051). | 0.753 |
DivIVA | PTH_1825 | PTH_1824 | PTH_1825 | Cell division initiation protein. | Predicted integral membrane protein. | 0.849 |
DivIVA | PTH_1828 | PTH_1824 | PTH_1828 | Cell division initiation protein. | Predicted enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.859 |
DivIVA | PTH_1829 | PTH_1824 | PTH_1829 | Cell division initiation protein. | Hypothetical protein. | 0.574 |
DivIVA | PTH_1832 | PTH_1824 | PTH_1832 | Cell division initiation protein. | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.537 |
DivIVA | ProC | PTH_1824 | PTH_1826 | Cell division initiation protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.644 |
DivIVA | sepF | PTH_1824 | PTH_1827 | Cell division initiation protein. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.902 |
PTH_1821 | DivIVA | PTH_1821 | PTH_1824 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Cell division initiation protein. | 0.719 |
PTH_1821 | PTH_1822 | PTH_1821 | PTH_1822 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Hypothetical protein. | 0.773 |
PTH_1821 | PTH_1823 | PTH_1821 | PTH_1823 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Hypothetical protein; Containing ADP-ribose pyrophosphatase region (COG1051). | 0.615 |
PTH_1821 | PTH_1825 | PTH_1821 | PTH_1825 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Predicted integral membrane protein. | 0.629 |
PTH_1821 | PTH_1828 | PTH_1821 | PTH_1828 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Predicted enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.561 |
PTH_1821 | PTH_1829 | PTH_1821 | PTH_1829 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Hypothetical protein. | 0.436 |
PTH_1821 | ProC | PTH_1821 | PTH_1826 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.521 |
PTH_1821 | sepF | PTH_1821 | PTH_1827 | Uncharacterized conserved protein; Belongs to the UPF0235 family. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.450 |
PTH_1822 | DivIVA | PTH_1822 | PTH_1824 | Hypothetical protein. | Cell division initiation protein. | 0.595 |
PTH_1822 | PTH_1821 | PTH_1822 | PTH_1821 | Hypothetical protein. | Uncharacterized conserved protein; Belongs to the UPF0235 family. | 0.773 |
PTH_1822 | PTH_1823 | PTH_1822 | PTH_1823 | Hypothetical protein. | Hypothetical protein; Containing ADP-ribose pyrophosphatase region (COG1051). | 0.615 |
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