STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
PTH_2010NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit, chain G. (574 aa)    
Predicted Functional Partners:
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.989
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.979
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
 
 
 0.978
PTH_2645
Hypothetical formate dehydrogenase; Containing partial COG3383, Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.961
NuoE-2
NADH:ubiquinone oxidoreductase, 24 kD subunit.
 
 0.950
NapF
Ferredoxin.
  
 
 0.940
NuoE
NADH:ubiquinone oxidoreductase 24 kD subunit.
 
 0.924
NuoE-3
NADH:ubiquinone oxidoreductase 24 kD subunit.
 
 0.911
PTH_0027
Hypothetical protein.
  
 
 0.881
GltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
    
 0.869
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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