STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BaeS-2Signal transduction histidine kinase. (428 aa)    
Predicted Functional Partners:
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
 
0.956
BaeS-4
Signal transduction histidine kinase.
 
 
0.940
OmpR-7
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.908
OmpR-6
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.898
CitB-5
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.897
OmpR-8
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.897
OmpR-2
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.896
PTH_0245
Hypothetical protein; Containing OmpR response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (COG0745).
 
 
 0.896
OmpR
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.895
OmpR-3
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.892
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.