Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_2083Hypothetical protein. (692 aa)    
Predicted Functional Partners:
FlgD
Flagellar hook capping protein.
  
 
 0.989
FliY
Flagellum motor switch protein.
  
  
 0.974
FliJ
Flagellar biosynthesis chaperone.
 
  
 0.970
FliI
Flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.969
FliM
Flagellar motor switch protein.
  
  
 0.957
FliL
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.957
FliF
Flagellar biosynthesis/type III secretory pathway lipoprotein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.955
FliG
Flagellar motor switch protein.
  
  
 0.954
FliH
Flagellar biosynthesis/type III secretory pathway protein.
  
  
 0.953
FliE
Flagellar hook-basal body protein.
  
  
 0.944
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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