STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FlgMNegative regulator of flagellin synthesis; Anti-sigma28 factor. (97 aa)    
Predicted Functional Partners:
FliA-6
DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
  
 0.987
PTH_2113
Hypothetical protein.
  
  
 0.974
FlgK
Flagellar hook-associated protein.
  
  
 0.936
FliS
Flagellin-specific chaperone FliS.
  
 
 0.933
CheW
Chemotaxis signal transduction protein.
  
  
 0.927
FlgL
Flagellin and related hook-associated proteins.
  
  
 0.925
CheA
Chemotaxis protein histidine kinase and related kinases.
  
 
 0.907
FliA
DNA-directed RNA polymerase specialized sigma subunit; Belongs to the sigma-70 factor family.
  
 
 0.864
FliA-2
DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.864
FliA-3
DNA-directed RNA polymerase specialized sigma subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
  
 
 0.864
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.