Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2144DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (368 aa)    
Predicted Functional Partners:
PTH_2145
Hypothetical protein.
       0.776
PTH_2146
Hypothetical protein.
       0.773
PTH_2667
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.753
PTH_2177
RTX toxins and related Ca2+-binding proteins.
 
    0.729
PTH_2193
Hypothetical protein; Containing partial COG5410, Uncharacterized protein conserved in bacteria and partial COG5362, Phage-related terminase.
 
    0.669
PblB
Phage-related protein.
 
    0.641
PTH_2189
Hypothetical protein.
  
     0.567
DnaG-2
DNA primase; Bacterial type.
 
  
 0.543
HipB-2
Predicted transcriptional regulator.
  
     0.530
DnaC-2
DNA replication protein.
 
     0.514
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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