STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2159Hypothetical protein; Containing partial PhoH (COG1702), phosphate starvation-inducible protein PhoH, predicted ATPase. (255 aa)    
Predicted Functional Partners:
PolA-2
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
     0.672
PTH_2156
Holliday junction resolvase; Archaeal type.
       0.610
PTH_2157
Hypothetical protein.
       0.610
NrdD-2
Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
     0.584
PTH_2160
Hypothetical protein.
       0.584
PTH_2177
RTX toxins and related Ca2+-binding proteins.
  
     0.539
CafA
Ribonucleases G and E.
  
    0.504
PrkA
Putative Ser protein kinase.
   
  
 0.464
PTH_1644
Uncharacterized conserved protein; Belongs to the UPF0229 family.
   
    0.446
PTH_2161
Hypothetical protein.
       0.446
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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