STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HipB-2Predicted transcriptional regulator. (137 aa)    
Predicted Functional Partners:
PTH_2163
Hypothetical protein.
       0.773
PTH_2177
RTX toxins and related Ca2+-binding proteins.
  
     0.760
PblB
Phage-related protein.
  
     0.685
MreB
Actin-like ATPase; Involved in cell morphogenesis.
   
 
 0.683
PTH_2189
Hypothetical protein.
  
     0.683
MreB-2
Actin-like ATPase; Involved in cell morphogenesis.
   
 
 0.683
PTH_1102
Hypothetical protein; Containing fibronectin type 3 domain.
  
     0.637
PgsA
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.630
DnaG-2
DNA primase; Bacterial type.
 
    0.597
DnaC-2
DNA replication protein.
  
     0.579
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.