STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2227Uncharacterized protein conserved in bacteria. (250 aa)    
Predicted Functional Partners:
PTH_2228
Uncharacterized conserved protein; Belongs to the glycosyl hydrolase 57 family.
 
     0.928
PspA
Suppresse phage shock protein A; (IM30), sigma54-dependent transcription.
  
     0.700
ManB-3
Phosphomannomutase.
 
     0.693
RfaG-13
Glycosyltransferase.
  
     0.689
PTH_1815
Hypothetical membrane protein.
  
     0.581
PTH_2516
Hypothetical protein.
  
     0.551
PTH_2820
Hypothetical membrane protein.
  
     0.536
PTH_1298
Hypothetical membrane protein.
  
     0.534
FimT
Tfp pilus assembly protein FimT.
  
     0.521
PTH_2860
Hypothetical protein; Containing partial COG4235, Cytochrome c biogenesis factor.
  
     0.515
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.