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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2228Uncharacterized conserved protein; Belongs to the glycosyl hydrolase 57 family. (536 aa)    
Predicted Functional Partners:
RfaG-13
Glycosyltransferase.
 
  
 0.969
PTH_2227
Uncharacterized protein conserved in bacteria.
 
     0.928
GlgP
Glucan phosphorylase.
    
 0.919
MalQ
4-alpha-glucanotransferase.
     
 0.908
RfaG-16
Glycosyltransferase.
 
 
  
 0.891
RfaG-3
Glycosyltransferase.
 
 
  
 0.890
RfaG-4
Glycosyltransferase.
 
 
  
 0.650
ManB-3
Phosphomannomutase.
 
     0.447
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
       0.445
GlpC-4
Fe-S oxidoreductase.
     
 0.420
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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