Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GlcD-2FAD/FMN-containing dehydrogenases. (465 aa)    
Predicted Functional Partners:
GlpC-4
Fe-S oxidoreductase.
 
 0.999
GlpC-3
Fe-S oxidoreductase.
 
 0.998
LldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.911
GlcD
FAD/FMN-containing dehydrogenases.
  
  
 
0.909
FadR
Transcriptional regulator.
  
  
 0.672
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
  
 0.627
FixB
Electron transfer flavoprotein, alpha subunit.
  
 
 0.570
FixB-3
Electron transfer flavoprotein, alpha subunit.
  
 
 0.570
FixB-4
Electron transfer flavoprotein, alpha subunit.
  
 
 0.570
FixB-5
Electron transfer flavoprotein, alpha subunit.
  
 
 0.570
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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