Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FadRTranscriptional regulator. (234 aa)    
Predicted Functional Partners:
LldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
 0.865
GlcD-2
FAD/FMN-containing dehydrogenases.
  
  
 0.672
IclR-2
Transcriptional regulator.
 
  
 0.658
DctP
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.613
GlpC-4
Fe-S oxidoreductase.
 
  
 0.578
IclR
Transcriptional regulator.
 
  
 0.576
GntR
Transcriptional regulator.
 
  
0.466
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
 
   
 0.458
PTH_2806
Hypothetical transcriptional regulator; Containing effector domain of the CAP family of transcription factors, Sigma-54 interaction domain and partial NapH (COG0348), Polyferredoxin.
   
  
 0.428
PykF
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.421
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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