STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2234Uncharacterized conserved protein; Containing a ferredoxin-like domain. (675 aa)    
Predicted Functional Partners:
PTH_2235
Uncharacterized conserved protein.
 
 
 0.999
PTH_0445
Hypothetical membrane protein; Containing NapF, ferredoxin (COG1145).
  
 
 0.917
HdrA
Heterodisulfide reductase, subunit A and related polyferredoxins.
  
 
 0.898
HdrA-2
Heterodisulfide reductase, subunit A and related polyferredoxins.
  
 
 0.898
GlpC-2
Fe-S oxidoreductase.
 
 
0.859
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
  
 
 0.849
HyaB
Ni,Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.839
PTH_0680
Hypothetical protein; Containing GlpC (COG0247), Fe-S oxidoreductase and partial GltD (COG0493), NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.833
PTH_0691
Hypothetical protein.
 
 
 0.802
FlpD
Methyl-viologen-reducing hydrogenase, delta subunit.
  
 
 0.788
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.