STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2235Uncharacterized conserved protein. (197 aa)    
Predicted Functional Partners:
PTH_2234
Uncharacterized conserved protein; Containing a ferredoxin-like domain.
 
 
 0.999
GlpC-4
Fe-S oxidoreductase.
 
 
 0.902
GlpC-3
Fe-S oxidoreductase.
 
 
 0.868
PTH_0691
Hypothetical protein.
 
 
 0.803
RnfC
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
  
 
 0.751
PTH_2644
Hypothetical protein; Containing partial COG1139, uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.751
GlpC-2
Fe-S oxidoreductase.
 
 
 0.702
Pta-4
BioD-like N-terminal domain of phosphotransacetylase.
  
    0.694
FadR-2
Transcriptional regulator.
 
   
 0.656
PTH_0680
Hypothetical protein; Containing GlpC (COG0247), Fe-S oxidoreductase and partial GltD (COG0493), NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.653
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.