Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PTH_2253Predicted NADH:ubiquinone oxidoreductase. (182 aa)    
Predicted Functional Partners:
CdhD
CO dehydrogenase/acetyl-CoA synthase delta subunit; Corrinoid Fe-S protein.
  
     0.756
CdhE
CO dehydrogenase/acetyl-CoA synthase gamma subunit; Corrinoid Fe-S protein.
  
     0.755
PTH_1005
Hypothetical protein.
  
     0.750
CooC
CO dehydrogenase maturation factor.
  
     0.734
PTH_1484
Formylmethanofuran dehydrogenase subunit E.
  
     0.691
Wzb
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.677
PTH_1873
Hypothetical protein.
  
     0.633
MetF
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
     0.593
PTH_1002
Uncharacterized metal-binding protein.
  
     0.532
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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