STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LivK-4ABC-type branched-chain amino acid transport systems, periplasmic component. (402 aa)    
Predicted Functional Partners:
LivM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
LivH
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
LivH-3
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
LivH-4
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
LivH-2
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.868
LivM-2
ABC-type branched-chain amino acid transport system, permeasecomponent; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.868
LivG
ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 0.866
LivG-4
ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 0.864
LivG-3
ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 0.837
LivF
ABC-type branched-chain amino acid transport systems, ATPase component.
 
  
 0.825
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.