STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlnQABC-type polar amino acid transport system, ATPase component. (364 aa)    
Predicted Functional Partners:
HisJ
ABC-type amino acid transport/signal transduction system.
 
 0.999
ModC
ABC-type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.904
SalY
ABC-type antimicrobial peptide transport system, permease component.
 
      0.899
SalY-2
ABC-type antimicrobial peptide transport system, permease component.
 
      0.899
DppC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
    
 0.765
PTH_1514
ABC-type multidrug transport system, permease component.
 
      0.760
LivM-2
ABC-type branched-chain amino acid transport system, permeasecomponent; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.646
ArgG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.632
LivM
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.601
GltB-2
Glutamate synthase domain 2.
  
  
 0.590
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.