STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AslB-3Arylsulfatase regulator; Fe-S oxidoreductase. (368 aa)    
Predicted Functional Partners:
PTH_2345
Hypothetical protein.
      0.842
PTH_2177
RTX toxins and related Ca2+-binding proteins.
  
     0.629
PblB
Phage-related protein.
  
     0.500
PTH_2342
Hypothetical protein.
       0.499
PTH_2343
Hypothetical protein.
       0.499
PTH_2189
Hypothetical protein.
  
     0.476
PTH_1102
Hypothetical protein; Containing fibronectin type 3 domain.
  
     0.421
RbsB
ABC-type sugar transport system, periplasmic component.
  
     0.412
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.