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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SunTABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (891 aa)    
Predicted Functional Partners:
SunT-2
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 
0.961
AcrA-4
Membrane-fusion protein.
 
 
 0.935
PstB
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.900
CbiO-5
ABC-type cobalt transport system, ATPase component; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
    
0.876
RpoE-8
DNA-directed RNA polymerase specialized sigma; Belongs to the sigma-70 factor family.
  
     0.729
PTH_2288
Hypothetical protein.
  
     0.655
PTH_1119
Hypothetical protein; Containing WcaA (COG0463), glycosyltransferases involved in cell wall biogenesis and TPR, Tetratricopeptide repeat domain.
  
  
 0.615
AcrA
Membrane-fusion protein.
  
 
 0.589
AcrA-2
Membrane-fusion protein.
  
 
 0.589
AcrA-3
Membrane-fusion protein.
  
 
 0.589
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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