STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2410Hypothetical protein. (420 aa)    
Predicted Functional Partners:
PTH_0149
Transposase.
  
     0.537
PTH_1594
Transposase.
  
     0.537
PTH_2526
Hypothetical membrane protein.
  
     0.529
PTH_2411
Hypothetical protein.
       0.458
PTH_1897
Hypothetical protein; Containing partial Tra8, transposase and inactivated derivatives, IS30 family (COG2826).
  
     0.426
PTH_1907
Transposase; Containing interrase core dimain COG2801.
  
     0.426
PTH_2140
Hypothetical protein related to integrase; Containing partial COG3316, transposase and inactivated derivatives.
  
     0.426
PTH_2426
Hypothetical protein; Containing integrase core domain.
  
     0.426
ExeA-2
Type II secretory pathway, component ExeA; Predicted ATPase.
  
     0.416
ExeA-3
Type II secretory pathway, component ExeA; Predicted ATPase.
  
     0.416
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.