STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaiA-9acyl-CoA dehydrogenases. (366 aa)    
Predicted Functional Partners:
FadB
3-hydroxyacyl-CoA dehydrogenase.
 
 0.940
FixB-6
Electron transfer flavoprotein, alpha subunit.
 
 0.913
FixB-4
Electron transfer flavoprotein, alpha subunit.
 
 0.866
FixB
Electron transfer flavoprotein, alpha subunit.
 
 0.863
FixA-5
Electron transfer flavoprotein, beta subunit.
  
 
 0.843
FixB-3
Electron transfer flavoprotein, alpha subunit.
 
 0.805
FixC-6
Dehydrogenases; Flavoproteins.
  
  
 0.763
GltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
  
 0.740
GltD-2
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
  
 0.740
GltD-3
NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
  
 0.740
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.