STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaiA-10acyl-CoA dehydrogenases. (381 aa)    
Predicted Functional Partners:
FixB-6
Electron transfer flavoprotein, alpha subunit.
 
 0.923
FixB
Electron transfer flavoprotein, alpha subunit.
 
 0.920
FixB-4
Electron transfer flavoprotein, alpha subunit.
 
 0.920
FixB-3
Electron transfer flavoprotein, alpha subunit.
 
 0.872
FixA-5
Electron transfer flavoprotein, beta subunit.
  
 
 0.805
FadB
3-hydroxyacyl-CoA dehydrogenase.
 
 0.751
CaiA-9
acyl-CoA dehydrogenases.
 
    
0.726
CaiD
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.710
PaaJ
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.660
FixB-5
Electron transfer flavoprotein, alpha subunit.
 
 0.650
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.