STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2451Hypothetical integrase; Containing partial XerD (COG4974), site-specific recombinase XerD. (361 aa)    
Predicted Functional Partners:
PTH_2450
Hypothetical integrase; Containing XerD (COG4974), site-specific recombinase XerD.
     0.946
XerD-2
Site-specific recombinase XerD.
 
     0.775
XerD-6
Site-specific recombinase XerD.
 
     0.775
XerC
Integrase.
 
     0.775
XerC-4
Integrase.
 
     0.775
PTH_2659
Hypothetical protein; Containing XerD (COG4974), site-specific recombinase XerD.
 
     0.775
PTH_2449
Hypothetical protein.
       0.773
XerD-4
Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
     0.725
XerD-5
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.620
RfaG-14
Glycosyltransferase.
  
     0.514
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.