STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2474Hypothetical membrane protein. (177 aa)    
Predicted Functional Partners:
PTH_2472
Hypothetical protein.
       0.773
PTH_2473
Hypothetical protein.
       0.773
PTH_2475
Hypothetical protein.
       0.773
PTH_2476
Hypothetical protein.
       0.773
PTH_2477
Hypothetical protein.
       0.737
VirD4
Type IV secretory pathway, VirD4 components.
 
    0.556
PTH_1117
Hypothetical protein.
  
     0.555
PTH_1118
Hypothetical protein; Containing WcaA (COG0463), glycosyltransferases involved in cell wall biogenesis and PilF (COG3063), tfp pilus assembly protein PilF.
  
   
 0.530
PTH_1119
Hypothetical protein; Containing WcaA (COG0463), glycosyltransferases involved in cell wall biogenesis and TPR, Tetratricopeptide repeat domain.
  
     0.425
PTH_2470
Hypothetical membrane protein.
       0.412
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.