Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
WcaJ-2Sugar transferases involved in lipopolysaccharide synthesis. (473 aa)    
Predicted Functional Partners:
PTH_1120
Hypothetical protein; Containing two Glycos_transf_2, Glycosyl transferase domain, TPR, Tetratricopeptide repeat domain and partial COG1216, predicted glycosyltransferases.
  
  
 0.946
WecG
Teichoic acid biosynthesis proteins; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.931
Mrp-2
ATPase involved in chromosome partitioning.
 
  
 0.908
PTH_1093
Capsular polysaccharide biosynthesis protein.
 
  
 0.902
RfbX
Membrane protein; Involved in the export of O-antigen and teichoic acid.
  
  
 0.879
PTH_0407
Hypothetical membrane protein.
  
  
 0.879
ManB-3
Phosphomannomutase.
  
  
 0.865
PTH_1112
Capsular polysaccharide biosynthesis protein.
 
  
 0.861
PTH_2565
Hypothetical membrane protein.
  
 0.858
PTH_2726
Hypothetical protein; Containing LbetaH domain.
 
  
 0.856
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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