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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2573Containing RfaG (COG0438), glycosyltransferase. (503 aa)    
Predicted Functional Partners:
PTH_2572
Containing COG0438, RfaG, glycosyltransferase.
      0.773
PTH_2570
Hypothetical protein; Containing AslB (COG0641), arylsulfatase regulator (Fe-S oxidoreductase).
 
     0.624
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.548
RfaG-14
Glycosyltransferase.
 
    
0.500
PTH_2571
Hypothetical protein.
       0.499
GlgB
1,4-alpha-glucan branching enzyme.
   
 0.497
RfbC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
  
 0.434
PTH_2581
Containing COG1215, glycosyltransferases, probably involved in cell wall biogenesis and COG1216, predicted glycosyltransferases domain.
 
  
 0.434
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.