STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HipB-3Predicted transcriptional regulator. (171 aa)    
Predicted Functional Partners:
PTH_2198
ABC-type ATPase; Fused to a predicted acetyltransferase domain.
  
     0.563
PTH_0180
Hypothetical protein.
  
     0.518
PTH_0194
Hypothetical membrane protein.
  
     0.495
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
   
 
 0.466
PTH_2197
Hypothetical protein.
 
     0.446
PTH_0164
Predicted transcriptional regulator.
  
     0.438
CheY-3
FOG: CheY-like receiver.
    
 
 0.438
PTH_2193
Hypothetical protein; Containing partial COG5410, Uncharacterized protein conserved in bacteria and partial COG5362, Phage-related terminase.
  
     0.424
PTH_2798
Hypothetical serine protease; Containing Peptidase_S8, Subtilase family.
  
    0.405
PTH_1778
Membrane signaling protein; Containing NtrB (COG3852), signal transduction histidine kinase.
  
     0.402
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.