STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2599Hypothetical membrane protein; Containing partial SleB (COG3773), cell wall hydrolyses involved in spore germination and partial COG3858, predicted glycosyl hydrolase. (266 aa)    
Predicted Functional Partners:
PTH_2852
Hypothetical membrane protein.
 
  
 0.590
PTH_1836
Hypothetical protein; Containing LysM domain.
  
     0.485
SplB-3
DNA repair photolyase.
       0.477
PTH_1023
Hypothetical protein; Containing LytE (COG1388), FOG: LysM repeat.
 
    
0.451
PTH_1756
Hypothetical protein; Containing Small acid-soluble spore proteins domain.
  
    0.418
PTH_1431
Hypothetical protein; Containing partial ErfK (COG1376), Uncharacterized protein conserved in bacteria.
  
  
 0.407
PblB
Phage-related protein.
  
    0.405
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.