STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2612Hypothetical protein. (141 aa)    
Predicted Functional Partners:
PTH_2613
Hypothetical signal transduction receptor; Containing COG4252, predicted transmembrane sensor domain and partial CyaA (COG2114), Adenylate cyclase, family 3.
   
 0.994
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
 
 
 0.840
PTH_2615
Hypothetical replicative DNA helicase; Containing FhlA (COG2203), FOG: GAF domain and partial COG2206, HD-GYP domain.
 
  
 0.789
PTH_2806
Hypothetical transcriptional regulator; Containing effector domain of the CAP family of transcription factors, Sigma-54 interaction domain and partial NapH (COG0348), Polyferredoxin.
  
 0.735
PTH_2679
Hypothetical protein; Containing COG1655, Uncharacterized protein conserved in bacteria and partial Crp (COG0664), cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
 0.734
BaeS-4
Signal transduction histidine kinase.
 
 
 
 0.676
CitT-3
Di- and tricarboxylate transporters.
  
 0.561
PTH_1597
Hypothetical protein; Containing COG3852 NtrB, signal transduction histidine kinase and COG3706 PleD, response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.540
Crp
cAMP-binding proteins; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
 0.524
PTH_2614
Hypothetical membrane protein.
       0.500
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.