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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MesJ-2Predicted ATPase; PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family. (250 aa)    
Predicted Functional Partners:
SIR2-3
NAD-dependent protein deacetylases; SIR2 family.
       0.723
ThiS-2
Sulfur transfer protein; Involved in thiamine biosynthesis.
  
 
 0.675
ThiS-3
Sulfur transfer protein; Involved in thiamine biosynthesis.
  
 
 0.675
PTH_0252
ATP-utilizing enzymes; PP-loop superfamily.
 
    0.603
PTH
peptidyl-tRNA hydrolase.
  
  
 0.548
PTH_2666
Hypothetical protein.
       0.547
PTH_1236
Hypothetical protein; Containing COG0517and COG0617 domains; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 
 0.505
PTH_2629
ATP-utilizing enzymes of the PP-loop superfamily.
 
    0.488
UvrB
Helicase subunit of the DNA excision repair complex.
  
  
 0.467
PTH_0117
Hypothetical protein; Containing SrmB, superfamily II DNA and RNA helicases (COG0513) and TRCF domain.
  
  
 0.467
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.