BisC-3 protein (Pelotomaculum thermopropionicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BisC-3

Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (767 aa)

Predicted Functional Partners:

HycB-2

0.818

FdnI

0.817

PTH_2706

0.791

HybA

0.767

HycB

0.765

MobA

0.749

HybA-3

0.738

HybA-2

0.731

SoxR

0.705

PTH_0670

0.654

Your Current Organism:

Pelotomaculum thermopropionicum

NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BisC-3	FdnI	PTH_2707	PTH_2705	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Cytochrome b subunit of formate dehydrogenase.	0.817
BisC-3	HybA	PTH_2707	PTH_0669	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Fe-S-cluster-containing hydrogenase components 1.	0.767
BisC-3	HybA-2	PTH_2707	PTH_1703	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Fe-S-cluster-containing hydrogenase components 1.	0.731
BisC-3	HybA-3	PTH_2707	PTH_1713	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Fe-S-cluster-containing hydrogenase components 1.	0.738
BisC-3	HycB	PTH_2707	PTH_0486	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Fe-S-cluster; Containing hydrogenase components 2.	0.765
BisC-3	HycB-2	PTH_2707	PTH_0609	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Fe-S-cluster-containing hydrogenase components 2.	0.818
BisC-3	MobA	PTH_2707	PTH_1127	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.	0.749
BisC-3	PTH_0670	PTH_2707	PTH_0670	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Hypothetical protein.	0.654
BisC-3	PTH_2706	PTH_2707	PTH_2706	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Hypothetical protein; Containing 4Fe-4S binding domain.	0.791
BisC-3	SoxR	PTH_2707	PTH_2704	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Predicted transcriptional regulator.	0.705
FdnI	BisC-3	PTH_2705	PTH_2707	Cytochrome b subunit of formate dehydrogenase.	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.817
FdnI	HybA	PTH_2705	PTH_0669	Cytochrome b subunit of formate dehydrogenase.	Fe-S-cluster-containing hydrogenase components 1.	0.976
FdnI	HybA-2	PTH_2705	PTH_1703	Cytochrome b subunit of formate dehydrogenase.	Fe-S-cluster-containing hydrogenase components 1.	0.978
FdnI	HybA-3	PTH_2705	PTH_1713	Cytochrome b subunit of formate dehydrogenase.	Fe-S-cluster-containing hydrogenase components 1.	0.977
FdnI	HycB	PTH_2705	PTH_0486	Cytochrome b subunit of formate dehydrogenase.	Fe-S-cluster; Containing hydrogenase components 2.	0.971
FdnI	HycB-2	PTH_2705	PTH_0609	Cytochrome b subunit of formate dehydrogenase.	Fe-S-cluster-containing hydrogenase components 2.	0.972
FdnI	PTH_2706	PTH_2705	PTH_2706	Cytochrome b subunit of formate dehydrogenase.	Hypothetical protein; Containing 4Fe-4S binding domain.	0.708
FdnI	SoxR	PTH_2705	PTH_2704	Cytochrome b subunit of formate dehydrogenase.	Predicted transcriptional regulator.	0.773
HybA	BisC-3	PTH_0669	PTH_2707	Fe-S-cluster-containing hydrogenase components 1.	Anaerobic dehydrogenases; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.767
HybA	FdnI	PTH_0669	PTH_2705	Fe-S-cluster-containing hydrogenase components 1.	Cytochrome b subunit of formate dehydrogenase.	0.976

page 1 of 4

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About