STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2772Hypothetical protein; Containing glycosyl transferases group 1 domain. (386 aa)    
Predicted Functional Partners:
RfaG-16
Glycosyltransferase.
     0.928
PTH_2774
Hypothetical protein.
 
  
 0.832
PTH_1084
Predicted glycosyltransferases.
 
  
 0.667
GlgB
1,4-alpha-glucan branching enzyme.
  
 0.580
PTH_2771
Hypothetical protein.
 
     0.565
PrfB
Protein chain release factor B; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
 
  
   0.521
WcaJ-2
Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.490
RfbC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
  
 0.449
PTH_1483
Hypothetical membrane protein; Containing ISOPREN_C2_like domain and SLH, S-layer homology domain.
  
    0.428
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.