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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2802Hypothetical protein; Containing partial CcmA (COG1131), ABC-type multidrug transport system, ATPase component. (235 aa)    
Predicted Functional Partners:
PTH_1514
ABC-type multidrug transport system, permease component.
  
 0.972
PTH_2804
ABC-type multidrug transport system, permease component.
  
 0.968
PTH_2803
ABC-type multidrug transport system, permease component.
  
 0.955
ZnuC
ABC-type Mn/Zn transport systems, ATPase component.
 
   
0.914
CcmA
ABC-type multidrug transport system, ATPase component.
 
    
0.906
EmrA
Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.899
LivG-4
ABC-type branched-chain amino acid transport systems, ATPase component.
 
    
0.882
CbiO
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.879
PTH_0772
Hypothetical membrane protein.
  
 
 0.775
LivG-2
ABC-type branched-chain amino acid transport systems, ATPase component.
 
    
0.698
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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