STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2803ABC-type multidrug transport system, permease component. (379 aa)    
Predicted Functional Partners:
PTH_2802
Hypothetical protein; Containing partial CcmA (COG1131), ABC-type multidrug transport system, ATPase component.
 
  
 0.960
EmrA
Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.949
CcmA-6
ABC-type multidrug transport system, ATPase component.
 
  
 0.840
CcmA-7
ABC-type multidrug transport system, ATPase component.
 
  
 0.839
AcrA-3
Membrane-fusion protein.
 
  
 0.791
PTH_2804
ABC-type multidrug transport system, permease component.
 
    
0.787
PTH_2785
Hypothetical protein.
 
  
 0.500
CcmA-2
ABC-type multidrug transport system, ATPase component.
 
  
 0.456
PTH_0377
Predicted metal-dependent membrane protease.
   
  
 0.455
NfnB
Nitroreductase.
  
  
 0.440
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.