STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CheY-3FOG: CheY-like receiver. (135 aa)    
Predicted Functional Partners:
PTH_1778
Membrane signaling protein; Containing NtrB (COG3852), signal transduction histidine kinase.
  
  
  0.972
CitB
Response regulator; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
 
0.935
CheY
FOG: CheY-like receiver.
  
  
 
0.912
BaeS-2
Signal transduction histidine kinase.
  
   
 0.781
NtrB
Signal transduction histidine kinase; Nitrogenspecific.
  
     0.774
NtrB-2
Signal transduction histidine kinase; Nitrogen specific.
  
     0.774
PTH_0047
Hypothetical signal transduction protein; Containing partial KdpD (COG2205).
  
     0.773
PTH_0246
Hypothetical protein; Containing BaeS signal transduction histidine kinase (COG0642).
  
     0.771
PTH_1422
Hypothetical membrane protein; Containing AtoS (COG2202), FOG: PAS/PAC domain, NtrB (COG3852), signal transduction histidine kinase, nitrogen specific and PAS domain.
  
     0.770
VicK
Signal transduction histidine kinase.
  
     0.767
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.