STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2859Hypothetical protein. (304 aa)    
Predicted Functional Partners:
PTH_2743
Hypothetical serine protease; Containing PDZ domain.
 
  
 0.727
PTH_0267
Hypothetical protein; Containing NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family (COG1902) and TrxB, thioredoxin reductase (COG0492).
  
 
 0.627
NemA-2
NADH:flavin oxidoreductases; Containing TrxB (COG0492), thioredoxin reductase domain.
  
 
 0.627
MurA-2
UDP-N-acetylglucosamine enolpyruvyl transferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.599
PTH_1021
Hypothetical protein.
  
     0.595
PTH_1163
Hypothetical protein.
  
     0.590
PTH_1969
Hypothetical membrane protein.
  
     0.587
PTH_0898
Hypothetical membrane protein.
  
 
   0.583
PTH_2860
Hypothetical protein; Containing partial COG4235, Cytochrome c biogenesis factor.
 
     0.581
PTH_1616
Hypothetical membrane protein.
  
     0.578
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.