STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NlpD-3Membrane protein; Related to metalloendopeptidases. (472 aa)    
Predicted Functional Partners:
FliY
Flagellum motor switch protein.
   
   0.687
PTH_2861
Hypothetical protein.
       0.572
PTH_2860
Hypothetical protein; Containing partial COG4235, Cytochrome c biogenesis factor.
       0.539
FtsX
Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.512
MrcB
Membrane carboxypeptidase; Penicillin-binding protein.
  
   
 0.511
MrcB-2
Membrane carboxypeptidase; Penicillin-binding protein.
  
   
 0.472
PTH_0078
Hypothetical membrane protein.
 
  
 0.469
FtsE
Predicted ATPase; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.447
mltG
Predicted periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
  
 0.429
FtsI-2
Cell division protein; FtsI/penicillin-binding protein 2.
  
   
 0.414
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.