STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2882Hypothetical protein; Belongs to the 'phage' integrase family. (219 aa)    
Predicted Functional Partners:
PTH_2881
Hypothetical protein.
       0.773
PinR-2
Site-specific recombinases; DNA invertase Pin homologs.
  
  
 0.616
PTH_2456
Hypothetical protein.
  
     0.601
PinR-3
Site-specific recombinases; DNA invertase Pin homologs.
  
  
 0.571
PTH_0489
Hypothetical membrane protein.
  
     0.566
PTH_1125
Hypothetical protein; Containing COG1961 domain.
  
  
 0.564
PTH_0485
Hypothetical protein; Containing MoCF_biosynth, Probable molybdopterin binding domain.
  
     0.431
PTH_0159
Hypothetical protein; Containing PinR, site-specific recombinases, DNA invertase Pin homologs (COG1961).
  
  
 0.427
PTH_2877
Hypothetical protein; Containing partial RepA (COG3598), RecA-family ATPase.
  
     0.416
ComFC
Predicted amidophosphoribosyltransferases.
   
    0.412
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.