STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2893Hypothetical transporter; Containing partial AraJ (COG2814), arabinose efflux permease and partial UhpC (COG2271), sugar phosphate permease. (474 aa)    
Predicted Functional Partners:
FabG-3
Dehydrogenases with different specificities; Related to short-chain alcohol dehydrogenases.
 
   
 0.692
ProP-2
Permeases of the major facilitator superfamily.
  
  
 0.633
LldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
   
 0.631
PTH_2895
Predicted metal-dependent hydrolase.
  
    0.625
PTH_2785
Hypothetical protein.
  
 
 0.514
PTH_2525
Hypothetical protein; Belongs to the major facilitator superfamily.
  
     0.475
PTH_2781
Hypothetical transporter; Belongs to the major facilitator superfamily.
  
     0.470
PTH_0142
Hypothetical protein; Containing predicted ATPase (COG3899), FhlA, FOG: GAF domain (COG2203), S_TKc, serine/threonine protein kinases, catalytic domain, His Kinase A (phosphoacceptor), HATPase_c, Histidine kinase-like ATPase, REC, signal receiver domain, and ArcB, FOG: HPt domain (COG2198).
      
 0.433
RpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.416
EutG-8
Alcohol dehydrogenase; Class IV.
       0.403
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.