STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EutG-8Alcohol dehydrogenase; Class IV. (383 aa)    
Predicted Functional Partners:
PTH_2897
Aldehyde:ferredoxin oxidoreductase.
  
  
 0.643
MmcM
Related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
  
 0.554
ThiS-3
Sulfur transfer protein; Involved in thiamine biosynthesis.
       0.548
FabG-3
Dehydrogenases with different specificities; Related to short-chain alcohol dehydrogenases.
  
 
 0.520
PTH_2895
Predicted metal-dependent hydrolase.
       0.493
Tdh-3
Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 
 0.492
GlgA
Glycogen synthase.
   
    0.439
PTH_2893
Hypothetical transporter; Containing partial AraJ (COG2814), arabinose efflux permease and partial UhpC (COG2271), sugar phosphate permease.
       0.406
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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