STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2897Aldehyde:ferredoxin oxidoreductase. (631 aa)    
Predicted Functional Partners:
ThiS-3
Sulfur transfer protein; Involved in thiamine biosynthesis.
       0.668
EutG-8
Alcohol dehydrogenase; Class IV.
  
  
 0.643
NuoF-3
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
  
 
 0.637
NuoF
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
    
   0.569
NuoF-2
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit.
    
   0.569
Pgk
3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.469
PepP
Xaa-Pro aminopeptidase.
      
 0.458
SpeB
Arginase/agmatinase/formimionoglutamate hydrolase; Arginase family; Belongs to the arginase family.
      
 0.457
PTH_2616
Molybdopterin biosynthesis enzyme; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.437
PTH_2895
Predicted metal-dependent hydrolase.
       0.410
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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