STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2902Uncharacterized protein conserved in bacteria. (67 aa)    
Predicted Functional Partners:
PTH_1063
Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family.
  
     0.763
PTH_1267
Predicted nucleic acid-binding protein; Implicated in transcription termination.
  
     0.743
MscS-2
Small-conductance mechanosensitive channel.
  
    0.671
PTH_1725
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.668
PTH_1802
Predicted RNA binding protein homologous to eukaryotic snRNP.
  
     0.668
ychF
Predicted GTPase, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.661
LAP4
Aspartyl aminopeptidase.
       0.632
PTH_0913
Predicted SAM-dependent methyltransferase.
  
     0.599
mutS2
Mismatch repair ATPase; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
  
     0.501
RfbX-2
Membrane protein; Involved in the export of O-antigen and teichoic acid.
  
     0.499
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.