STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2907Uncharacterized membrane protein. (357 aa)    
Predicted Functional Partners:
PTH_1957
Hypothetical protein.
 
     0.726
PTH_2908
Containing DUF1256, Protein of unknown function (DUF1256).
 
    0.720
PTH_0562
Hypothetical membrane protein.
  
    0.602
SpoIIM
Uncharacterized membrane protein.
  
    0.560
PTH_1170
Hypothetical membrane protein.
  
    0.503
PTH_0125
Hypothetical membrane protein.
  
     0.500
CvpA
Uncharacterized membrane protein; Required for colicin V production.
       0.494
PTH_1167
Hypothetical membrane protein.
  
    0.490
HgdB-2
benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit; BcrC/BadD/HgdB.
 
     0.487
SpoIVFB
Zn-dependent protease.
  
    0.473
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.