Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2907Uncharacterized membrane protein. (357 aa)    
Predicted Functional Partners:
PTH_1957
Hypothetical protein.
 
     0.725
PTH_2908
Containing DUF1256, Protein of unknown function (DUF1256).
 
    0.711
PTH_0562
Hypothetical membrane protein.
  
    0.600
SpoIIM
Uncharacterized membrane protein.
  
    0.570
PTH_1170
Hypothetical membrane protein.
  
    0.508
PTH_0125
Hypothetical membrane protein.
  
     0.500
PTH_1167
Hypothetical membrane protein.
  
    0.493
HgdB-2
benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit; BcrC/BadD/HgdB.
 
     0.486
SpoIVFB
Zn-dependent protease.
  
    0.473
CvpA
Uncharacterized membrane protein; Required for colicin V production.
       0.453
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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