STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTH_2908Containing DUF1256, Protein of unknown function (DUF1256). (200 aa)    
Predicted Functional Partners:
gpr
peptidase_U3, Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.775
PTH_1170
Hypothetical membrane protein.
  
     0.771
PTH_1169
Hypothetical membrane protein.
  
     0.768
PTH_1167
Hypothetical membrane protein.
  
     0.764
PTH_1172
Hypothetical membrane protein.
  
     0.755
PTH_1749
Uncharacterized protein conserved in bacteria.
  
    0.751
SpoIIM
Uncharacterized membrane protein.
  
     0.731
PTH_0888
Hypothetical protein; Containing DUF1429 domain.
  
     0.724
SpoIIIAA
Uncharacterized protein conserved in bacteria.
  
     0.723
PTH_2907
Uncharacterized membrane protein.
 
    0.720
Your Current Organism:
Pelotomaculum thermopropionicum
NCBI taxonomy Id: 370438
Other names: P. thermopropionicum SI, Pelotomaculum thermopropionicum SI, Pelotomaculum thermopropionicum str. SI, Pelotomaculum thermopropionicum strain SI
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.