STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH45715.1Creatinine amidohydrolase. (247 aa)    
Predicted Functional Partners:
SEH45708.1
Mycofactocin system glycosyltransferase.
 
  
 0.980
SEH93438.1
Mycofactocin system glycosyltransferase.
 
  
 0.917
SEH45747.1
Putative mycofactocin binding protein MftB.
 
   
 0.909
SEH45740.1
Mycofactocin radical SAM maturase.
 
  
 0.906
SEH93460.1
Putative mycofactocin binding protein MftB.
 
   
 0.833
SEH93455.1
Mycofactocin radical SAM maturase.
 
  
 0.829
SEH45697.1
Dehydrogenase, Rv0697 family.
       0.761
SEH45729.1
L-lactate dehydrogenase (cytochrome).
 
  
 0.742
SEH45761.1
Mycofactocin system transcriptional regulator.
 
     0.647
SEH76361.1
Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
    
  0.534
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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