STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH45740.1Mycofactocin radical SAM maturase. (399 aa)    
Predicted Functional Partners:
SEH45747.1
Putative mycofactocin binding protein MftB.
 
  
 0.986
SEH93460.1
Putative mycofactocin binding protein MftB.
 
  
 0.942
SEH45729.1
L-lactate dehydrogenase (cytochrome).
 
  
 0.936
SEH45708.1
Mycofactocin system glycosyltransferase.
 
   
 0.915
SEH45715.1
Creatinine amidohydrolase.
 
  
 0.906
SEH45761.1
Mycofactocin system transcriptional regulator.
 
  
 0.880
SEH93438.1
Mycofactocin system glycosyltransferase.
 
   
 0.844
SEH93446.1
Creatinine amidohydrolase.
 
  
 0.829
SEH45755.1
Mycofactocin precursor.
       0.773
SEH93469.1
Mycofactocin system transcriptional regulator.
 
  
 0.743
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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