STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH46712.1Protein of unknown function DUF58. (291 aa)    
Predicted Functional Partners:
SEH46720.1
MoxR-like ATPase.
 
  
 0.951
SEH46686.1
Hypothetical protein.
 
     0.934
SEH46694.1
Hypothetical protein.
 
     0.928
SEH46676.1
Hypothetical protein.
 
     0.919
SEH49154.1
MoxR-like ATPase.
 
  
 0.795
SEH46705.1
Hypothetical protein.
       0.790
SEH81184.1
Ca-activated chloride channel family protein.
 
  
 0.761
SEH46746.1
Protein of unknown function.
 
     0.746
SEH81191.1
Ca-activated chloride channel family protein.
 
  
 0.744
SEH81210.1
MoxR-like ATPase.
 
  
 0.735
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.